Protein–RNA interactions for Protein: Q9D071

Mms19, MMS19 nucleotide excision repair protein homolog, mousemouse

Predictions only

Length 1,031 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mms19Q9D071 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Gm24841-201ENSMUST00000158676 357 ntBASIC18.41■□□□□ 0.54
Mms19Q9D071 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC18.41■□□□□ 0.54
Mms19Q9D071 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.41■□□□□ 0.54
Mms19Q9D071 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Mms19Q9D071 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Mms19Q9D071 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.4■□□□□ 0.54
Mms19Q9D071 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Gm43799-201ENSMUST00000201845 579 ntBASIC18.4■□□□□ 0.54
Mms19Q9D071 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.4■□□□□ 0.54
Mms19Q9D071 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Mms19Q9D071 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.4■□□□□ 0.54
Mms19Q9D071 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Mms19Q9D071 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.39■□□□□ 0.53
Mms19Q9D071 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Mms19Q9D071 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.39■□□□□ 0.53
Mms19Q9D071 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Mms19Q9D071 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.39■□□□□ 0.53
Mms19Q9D071 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Mms19Q9D071 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Mms19Q9D071 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Mms19Q9D071 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Mms19Q9D071 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.38■□□□□ 0.53
Mms19Q9D071 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Gm6433-201ENSMUST00000118634 875 ntBASIC18.37■□□□□ 0.53
Mms19Q9D071 Gm13559-201ENSMUST00000120476 863 ntBASIC18.37■□□□□ 0.53
Mms19Q9D071 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Mms19Q9D071 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Mms19Q9D071 Fcho2-208ENSMUST00000224992 2964 ntBASIC18.36■□□□□ 0.53
Mms19Q9D071 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Mms19Q9D071 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.36■□□□□ 0.53
Mms19Q9D071 Gm11539-201ENSMUST00000119837 557 ntBASIC18.36■□□□□ 0.53
Mms19Q9D071 Gm13436-201ENSMUST00000120418 567 ntBASIC18.36■□□□□ 0.53
Mms19Q9D071 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.36■□□□□ 0.53
Mms19Q9D071 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Mms19Q9D071 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Mms19Q9D071 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Mms19Q9D071 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Mms19Q9D071 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms