Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.05□□□□□ -0.16
Hdhd3Q9CYW4 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hdhd3Q9CYW4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hdhd3Q9CYW4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.02□□□□□ -0.16
Hdhd3Q9CYW4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hdhd3Q9CYW4 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hdhd3Q9CYW4 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms