Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd1Q9CQX5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Rps4l-201ENSMUST00000071745 943 ntBASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Cldnd1Q9CQX5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd1Q9CQX5 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.58■□□□□ 0.41
Cldnd1Q9CQX5 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldnd1Q9CQX5 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldnd1Q9CQX5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldnd1Q9CQX5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd1Q9CQX5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
Cldnd1Q9CQX5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Cldnd1Q9CQX5 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms