Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Gm10566-201ENSMUST00000086739 996 ntBASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ClpsQ9CQC2 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Gm22697-201ENSMUST00000175194 63 ntBASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Mir1668-201ENSMUST00000184114 107 ntBASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ClpsQ9CQC2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Gm6659-201ENSMUST00000174752 547 ntBASIC16.81■□□□□ 0.28
ClpsQ9CQC2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ClpsQ9CQC2 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Gm10013-201ENSMUST00000106074 672 ntBASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Gm18101-201ENSMUST00000215769 548 ntBASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Actl10-202ENSMUST00000226583 1501 ntBASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ClpsQ9CQC2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
ClpsQ9CQC2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms