Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col25a1Q99MQ5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Col25a1Q99MQ5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col25a1Q99MQ5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col25a1Q99MQ5 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Col25a1Q99MQ5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Gm26308-201ENSMUST00000157768 69 ntBASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Col25a1Q99MQ5 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Gm4995-201ENSMUST00000117247 432 ntBASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Gm7862-201ENSMUST00000121461 292 ntBASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Col25a1Q99MQ5 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm37722-201ENSMUST00000193757 208 ntBASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm42670-201ENSMUST00000201816 1292 ntBASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Col25a1Q99MQ5 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Col25a1Q99MQ5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Gm6376-201ENSMUST00000209407 580 ntBASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.77■□□□□ 0.44
Col25a1Q99MQ5 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms