Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Gm12527-201ENSMUST00000117967 564 ntBASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Rnf111Q99ML9 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Gm13216-201ENSMUST00000117145 591 ntBASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Rnf111Q99ML9 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rnf111Q99ML9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Gm37856-201ENSMUST00000191634 999 ntBASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Trmt13-210ENSMUST00000198454 880 ntBASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rnf111Q99ML9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rnf111Q99ML9 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms