Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Col20a1Q923P0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC20.32■□□□□ 0.84
Col20a1Q923P0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Gm8969-201ENSMUST00000199694 526 ntBASIC20.32■□□□□ 0.84
Col20a1Q923P0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col20a1Q923P0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.31■□□□□ 0.84
Col20a1Q923P0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col20a1Q923P0 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.3■□□□□ 0.84
Col20a1Q923P0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col20a1Q923P0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Gm27000-201ENSMUST00000182943 842 ntBASIC20.29■□□□□ 0.84
Col20a1Q923P0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Gm10819-201ENSMUST00000099988 561 ntBASIC20.29■□□□□ 0.84
Col20a1Q923P0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.29■□□□□ 0.84
Col20a1Q923P0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col20a1Q923P0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Gm14859-201ENSMUST00000117752 357 ntBASIC20.28■□□□□ 0.84
Col20a1Q923P0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col20a1Q923P0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Col20a1Q923P0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col20a1Q923P0 Gm29518-201ENSMUST00000190858 372 ntBASIC20.27■□□□□ 0.84
Col20a1Q923P0 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.27■□□□□ 0.84
Col20a1Q923P0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Col20a1Q923P0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms