Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp1aQ921W0 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.22■□□□□ 0.03
Chmp1aQ921W0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Chmp1aQ921W0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Chmp1aQ921W0 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Chmp1aQ921W0 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Chmp1aQ921W0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Chmp1aQ921W0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms