Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Gm10231-201ENSMUST00000181584 441 ntBASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Gm10175-202ENSMUST00000208752 441 ntBASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdha11Q91Y19 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdha11Q91Y19 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Pcdha11Q91Y19 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.08■□□□□ 0.48
Pcdha11Q91Y19 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Gm8969-201ENSMUST00000199694 526 ntBASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Gm45058-201ENSMUST00000205810 766 ntBASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Pcdha11Q91Y19 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Mir5130-201ENSMUST00000175160 84 ntBASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pcdha11Q91Y19 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pcdha11Q91Y19 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms