Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.77■□□□□ 0.28
Pcdha8Q91Y12 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha8Q91Y12 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdha8Q91Y12 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdha8Q91Y12 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Gm13168-201ENSMUST00000121771 632 ntBASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Gm27011-201ENSMUST00000182352 972 ntBASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdha8Q91Y12 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Gm8520-201ENSMUST00000186517 868 ntBASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdha8Q91Y12 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Gm10698-201ENSMUST00000182663 604 ntBASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Gm43183-201ENSMUST00000200632 547 ntBASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdha8Q91Y12 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.73■□□□□ 0.27
Pcdha8Q91Y12 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdha8Q91Y12 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdha8Q91Y12 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms