Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhb2Q91Y00 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhb2Q91Y00 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Gm11539-201ENSMUST00000119837 557 ntBASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Gm13436-201ENSMUST00000120418 567 ntBASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhb2Q91Y00 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Gm6433-201ENSMUST00000118634 875 ntBASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pcdhb2Q91Y00 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Gm13559-201ENSMUST00000120476 863 ntBASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Pcdhb2Q91Y00 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Pcdhb2Q91Y00 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Pcdhb2Q91Y00 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Gm9731-201ENSMUST00000209480 747 ntBASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pcdhb2Q91Y00 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms