Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdhb4Q91XZ6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Mir8112-201ENSMUST00000184382 131 ntBASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcdhb4Q91XZ6 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcdhb4Q91XZ6 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.08■□□□□ 0.33
Pcdhb4Q91XZ6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb4Q91XZ6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb4Q91XZ6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pcdhb4Q91XZ6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Gm13401-201ENSMUST00000117074 291 ntBASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Gm15375-201ENSMUST00000119510 849 ntBASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pcdhb4Q91XZ6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Gm12441-201ENSMUST00000121806 588 ntBASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pcdhb4Q91XZ6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pcdhb4Q91XZ6 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb4Q91XZ6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms