Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdhgb1Q91XX8 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdhgb1Q91XX8 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Pcdhgb1Q91XX8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhgb1Q91XX8 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Gm37025-201ENSMUST00000195159 829 ntBASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Gm9731-201ENSMUST00000209480 747 ntBASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb1Q91XX8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Gm7370-201ENSMUST00000219471 767 ntBASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb1Q91XX8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb1Q91XX8 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms