Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pcdhgb4Q91XX6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Gm10698-201ENSMUST00000182663 604 ntBASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Gm10517-202ENSMUST00000192970 758 ntBASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pcdhgb4Q91XX6 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pcdhgb4Q91XX6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhgb4Q91XX6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Pcdhgb4Q91XX6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Pcdhgb4Q91XX6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Pcdhgb4Q91XX6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Gm4974-201ENSMUST00000209974 875 ntBASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhgb4Q91XX6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhgb4Q91XX6 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhgb4Q91XX6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhgb4Q91XX6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms