Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.72■□□□□ 0.75
Trex1Q91XB0 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trex1Q91XB0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Gm27742-201ENSMUST00000184667 60 ntBASIC19.71■□□□□ 0.75
Trex1Q91XB0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.71■□□□□ 0.75
Trex1Q91XB0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.71■□□□□ 0.75
Trex1Q91XB0 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trex1Q91XB0 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.71■□□□□ 0.75
Trex1Q91XB0 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Trex1Q91XB0 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Mir3081-201ENSMUST00000175305 84 ntBASIC19.7■□□□□ 0.74
Trex1Q91XB0 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trex1Q91XB0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Gm27357-201ENSMUST00000183754 135 ntBASIC19.69■□□□□ 0.74
Trex1Q91XB0 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC19.69■□□□□ 0.74
Trex1Q91XB0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trex1Q91XB0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trex1Q91XB0 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Gm45328-201ENSMUST00000210942 917 ntBASIC19.67■□□□□ 0.74
Trex1Q91XB0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.67■□□□□ 0.74
Trex1Q91XB0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trex1Q91XB0 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms