Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Gm36991-201ENSMUST00000191800 648 ntBASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhb17Q91VD8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb17Q91VD8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb17Q91VD8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb17Q91VD8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb17Q91VD8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Gm27463-201ENSMUST00000183569 57 ntBASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Gm44953-201ENSMUST00000208745 1286 ntBASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Gm7791-201ENSMUST00000219066 539 ntBASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb17Q91VD8 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Gm15565-201ENSMUST00000118890 427 ntBASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 AC114573.1-201ENSMUST00000224120 1210 ntBASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb17Q91VD8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Gm7430-201ENSMUST00000193824 1144 ntBASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb17Q91VD8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm11539-201ENSMUST00000119837 557 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm13436-201ENSMUST00000120418 567 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm13559-201ENSMUST00000120476 863 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 AC238940.1-201ENSMUST00000225106 1858 ntBASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb17Q91VD8 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms