Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Vsx1Q91V10 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.01■□□□□ 0.31
Vsx1Q91V10 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Gm26039-201ENSMUST00000158152 144 ntBASIC17.01■□□□□ 0.31
Vsx1Q91V10 Gm28659-201ENSMUST00000188013 759 ntBASIC17.01■□□□□ 0.31
Vsx1Q91V10 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Vsx1Q91V10 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Vsx1Q91V10 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Gm13401-201ENSMUST00000117074 291 ntBASIC17■□□□□ 0.31
Vsx1Q91V10 Gm11860-201ENSMUST00000122346 1010 ntBASIC17■□□□□ 0.31
Vsx1Q91V10 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17■□□□□ 0.31
Vsx1Q91V10 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17■□□□□ 0.31
Vsx1Q91V10 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
Vsx1Q91V10 Gm5864-201ENSMUST00000202263 970 ntBASIC17■□□□□ 0.31
Vsx1Q91V10 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Vsx1Q91V10 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Gm37820-201ENSMUST00000194021 2147 ntBASIC17■□□□□ 0.31
Vsx1Q91V10 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17■□□□□ 0.31
Vsx1Q91V10 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vsx1Q91V10 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Vsx1Q91V10 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17■□□□□ 0.31
Vsx1Q91V10 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Mir770-201ENSMUST00000103252 94 ntBASIC16.99■□□□□ 0.31
Vsx1Q91V10 Olfr129-201ENSMUST00000122318 993 ntBASIC16.99■□□□□ 0.31
Vsx1Q91V10 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.99■□□□□ 0.31
Vsx1Q91V10 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Birc2-201ENSMUST00000054878 378 ntBASIC16.99■□□□□ 0.31
Vsx1Q91V10 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.99■□□□□ 0.31
Vsx1Q91V10 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Vsx1Q91V10 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.98■□□□□ 0.31
Vsx1Q91V10 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Gm13884-201ENSMUST00000118103 829 ntBASIC16.98■□□□□ 0.31
Vsx1Q91V10 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Vsx1Q91V10 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Vsx1Q91V10 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.97■□□□□ 0.31
Vsx1Q91V10 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Vsx1Q91V10 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Vsx1Q91V10 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Gm9731-201ENSMUST00000209480 747 ntBASIC16.96■□□□□ 0.31
Vsx1Q91V10 Il3ra-202ENSMUST00000223589 738 ntBASIC16.96■□□□□ 0.31
Vsx1Q91V10 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Vsx1Q91V10 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Vsx1Q91V10 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.96■□□□□ 0.3
Vsx1Q91V10 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vsx1Q91V10 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vsx1Q91V10 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Vsx1Q91V10 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Vsx1Q91V10 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms