Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
H1fooQ8VIK3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Gm37856-201ENSMUST00000191634 999 ntBASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
H1fooQ8VIK3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
H1fooQ8VIK3 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Gm12527-201ENSMUST00000117967 564 ntBASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Gm12382-201ENSMUST00000122005 922 ntBASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Gm29257-201ENSMUST00000186115 639 ntBASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.41□□□□□ -0.1
H1fooQ8VIK3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
H1fooQ8VIK3 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms