Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.31■□□□□ 0.52
TraipQ8VIG6 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.3■□□□□ 0.52
TraipQ8VIG6 AC122351.1-201ENSMUST00000220467 126 ntBASIC18.3■□□□□ 0.52
TraipQ8VIG6 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TraipQ8VIG6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.29■□□□□ 0.52
TraipQ8VIG6 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.29■□□□□ 0.52
TraipQ8VIG6 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.28■□□□□ 0.52
TraipQ8VIG6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.28■□□□□ 0.52
TraipQ8VIG6 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Gm14859-201ENSMUST00000117752 357 ntBASIC18.27■□□□□ 0.52
TraipQ8VIG6 Gm27704-201ENSMUST00000185094 107 ntBASIC18.27■□□□□ 0.52
TraipQ8VIG6 Gm37722-201ENSMUST00000193757 208 ntBASIC18.27■□□□□ 0.52
TraipQ8VIG6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TraipQ8VIG6 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TraipQ8VIG6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TraipQ8VIG6 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Gm37437-201ENSMUST00000194451 1937 ntBASIC18.26■□□□□ 0.51
TraipQ8VIG6 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.26■□□□□ 0.51
TraipQ8VIG6 Gm17808-201ENSMUST00000200859 894 ntBASIC18.26■□□□□ 0.51
TraipQ8VIG6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.26■□□□□ 0.51
TraipQ8VIG6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TraipQ8VIG6 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TraipQ8VIG6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms