Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdh18Q8VHR0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdh18Q8VHR0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Gm42569-201ENSMUST00000200539 472 ntBASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdh18Q8VHR0 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdh18Q8VHR0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Gm26571-201ENSMUST00000181399 666 ntBASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.56■□□□□ 0.24
Pcdh18Q8VHR0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pcdh18Q8VHR0 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
Pcdh18Q8VHR0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms