Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Rab40cQ8VHQ4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab40cQ8VHQ4 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Rab40cQ8VHQ4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Rab40cQ8VHQ4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Rab40cQ8VHQ4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.07□□□□□ -0.16
Rab40cQ8VHQ4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rab40cQ8VHQ4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Rab40cQ8VHQ4 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms