Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Rprd1aQ8VDS4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Rprd1aQ8VDS4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Rprd1aQ8VDS4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Gm13559-201ENSMUST00000120476 863 ntBASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.69■□□□□ 0.42
Rprd1aQ8VDS4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Rprd1aQ8VDS4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Gm9731-201ENSMUST00000209480 747 ntBASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Rprd1aQ8VDS4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gm6433-201ENSMUST00000118634 875 ntBASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gm8969-201ENSMUST00000199694 526 ntBASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gm7791-201ENSMUST00000219066 539 ntBASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Rprd1aQ8VDS4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms