Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC16.83■□□□□ 0.28
Q8VDP2 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Q8VDP2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Q8VDP2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Q8VDP2 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.82■□□□□ 0.28
Q8VDP2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.82■□□□□ 0.28
Q8VDP2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Q8VDP2 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
Q8VDP2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Q8VDP2 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.81■□□□□ 0.28
Q8VDP2 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Q8VDP2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Q8VDP2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Q8VDP2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Q8VDP2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Q8VDP2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Q8VDP2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Q8VDP2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Q8VDP2 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Q8VDP2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Q8VDP2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Q8VDP2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.79■□□□□ 0.28
Q8VDP2 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.79■□□□□ 0.28
Q8VDP2 Gm27454-201ENSMUST00000185090 204 ntBASIC16.79■□□□□ 0.28
Q8VDP2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.79■□□□□ 0.28
Q8VDP2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Q8VDP2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.78■□□□□ 0.28
Q8VDP2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8VDP2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8VDP2 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8VDP2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8VDP2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Q8VDP2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms