Protein–RNA interactions for Protein: Q8VCD7

Kdm4c, Lysine-specific demethylase 4C, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm4cQ8VCD7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Kdm4cQ8VCD7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Gm18284-201ENSMUST00000172604 624 ntBASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Kdm4cQ8VCD7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Mir5133-201ENSMUST00000174955 77 ntBASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Kdm4cQ8VCD7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Kdm4cQ8VCD7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Gm4968-201ENSMUST00000071458 858 ntBASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Kdm4cQ8VCD7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Gm2559-201ENSMUST00000201323 363 ntBASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Kdm4cQ8VCD7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Gm5408-201ENSMUST00000197998 747 ntBASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Gm42569-201ENSMUST00000200539 472 ntBASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Kdm4cQ8VCD7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms