Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ndc1Q8VCB1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Gm24841-201ENSMUST00000158676 357 ntBASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ndc1Q8VCB1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Gm2274-201ENSMUST00000184539 609 ntBASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc1Q8VCB1 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc1Q8VCB1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Gm7638-201ENSMUST00000121348 967 ntBASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Gm45058-201ENSMUST00000205810 766 ntBASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.21■□□□□ 0.19
Ndc1Q8VCB1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc1Q8VCB1 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc1Q8VCB1 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc1Q8VCB1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc1Q8VCB1 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms