Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Mir8112-201ENSMUST00000184382 131 ntBASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Gm7367-201ENSMUST00000057611 492 ntBASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atp2a1Q8R429 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Gm33142-201ENSMUST00000193913 867 ntBASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atp2a1Q8R429 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gm21559-201ENSMUST00000220638 855 ntBASIC19.23■□□□□ 0.67
Atp2a1Q8R429 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gm8587-201ENSMUST00000076538 843 ntBASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Gm10819-201ENSMUST00000099988 561 ntBASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Atp2a1Q8R429 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Gm25016-201ENSMUST00000158399 131 ntBASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atp2a1Q8R429 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Gm43272-201ENSMUST00000200599 1584 ntBASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atp2a1Q8R429 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.2■□□□□ 0.66
Atp2a1Q8R429 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atp2a1Q8R429 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms