Protein–RNA interactions for Protein: Q8R3B7

Brd8, Bromodomain-containing protein 8, mousemouse

Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brd8Q8R3B7 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Brd8Q8R3B7 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Brd8Q8R3B7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Brd8Q8R3B7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Gm5421-201ENSMUST00000181698 2354 ntBASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Gm8668-201ENSMUST00000120559 1447 ntBASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Brd8Q8R3B7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.53■□□□□ 0.4
Brd8Q8R3B7 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Brd8Q8R3B7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.52■□□□□ 0.4
Brd8Q8R3B7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms