Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Zcchc9Q8R1J3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Gm16061-201ENSMUST00000122167 857 ntBASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Zcchc9Q8R1J3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
Zcchc9Q8R1J3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Zcchc9Q8R1J3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Gm7638-201ENSMUST00000121348 967 ntBASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Zcchc9Q8R1J3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Gm13401-201ENSMUST00000117074 291 ntBASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Gm9103-201ENSMUST00000119371 405 ntBASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Gm7284-201ENSMUST00000131667 944 ntBASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Zcchc9Q8R1J3 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms