Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ddx54Q8K4L0 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Ddx54Q8K4L0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ddx54Q8K4L0 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Ddx54Q8K4L0 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Rprl3-201ENSMUST00000157400 290 ntBASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Mir5126-201ENSMUST00000175513 77 ntBASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Gm2756-201ENSMUST00000195851 400 ntBASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Ddx54Q8K4L0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Gm9885-202ENSMUST00000186234 2209 ntBASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Gm13830-205ENSMUST00000201195 1155 ntBASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Gm42670-201ENSMUST00000201816 1292 ntBASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC22.48■■□□□ 1.19
Ddx54Q8K4L0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Phf7-203ENSMUST00000226565 1971 ntBASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Gm12260-201ENSMUST00000122447 411 ntBASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ddx54Q8K4L0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Ddx54Q8K4L0 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Ddx54Q8K4L0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC22.45■■□□□ 1.18
Ddx54Q8K4L0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms