Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.25■□□□□ 0.19
Clrn1Q8K445 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.25■□□□□ 0.19
Clrn1Q8K445 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.25■□□□□ 0.19
Clrn1Q8K445 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Clrn1Q8K445 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.24■□□□□ 0.19
Clrn1Q8K445 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
Clrn1Q8K445 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.24■□□□□ 0.19
Clrn1Q8K445 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.24■□□□□ 0.19
Clrn1Q8K445 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Clrn1Q8K445 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Clrn1Q8K445 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Gm12085-201ENSMUST00000119263 940 ntBASIC16.22■□□□□ 0.19
Clrn1Q8K445 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Gm24841-201ENSMUST00000158676 357 ntBASIC16.22■□□□□ 0.19
Clrn1Q8K445 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Clrn1Q8K445 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.21■□□□□ 0.19
Clrn1Q8K445 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Clrn1Q8K445 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Clrn1Q8K445 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn1Q8K445 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn1Q8K445 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn1Q8K445 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Clrn1Q8K445 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms