Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Paf1Q8K2T8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Paf1Q8K2T8 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Gm37055-201ENSMUST00000191866 133 ntBASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Paf1Q8K2T8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Gm7638-201ENSMUST00000121348 967 ntBASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Gm10252-201ENSMUST00000209541 832 ntBASIC20.13■□□□□ 0.81
Paf1Q8K2T8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Paf1Q8K2T8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Gm9731-201ENSMUST00000209480 747 ntBASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Paf1Q8K2T8 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Paf1Q8K2T8 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Il3ra-202ENSMUST00000223589 738 ntBASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Gm5417-201ENSMUST00000079706 384 ntBASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Paf1Q8K2T8 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Gm43808-201ENSMUST00000202534 2065 ntBASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Paf1Q8K2T8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms