Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Cchcr1Q8K2I2 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Cxcl14-202ENSMUST00000224801 1467 ntBASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Gm4974-201ENSMUST00000209974 875 ntBASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cchcr1Q8K2I2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Gm12382-201ENSMUST00000122005 922 ntBASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cchcr1Q8K2I2 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gm16499-203ENSMUST00000204633 2177 ntBASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gm37292-201ENSMUST00000192062 758 ntBASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cchcr1Q8K2I2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cchcr1Q8K2I2 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.33■□□□□ 0.85
Cchcr1Q8K2I2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.33■□□□□ 0.84
Cchcr1Q8K2I2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cchcr1Q8K2I2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cchcr1Q8K2I2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cchcr1Q8K2I2 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cchcr1Q8K2I2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cchcr1Q8K2I2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms