Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hmgcll1Q8JZS7 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.71■□□□□ 0.43
Hmgcll1Q8JZS7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hmgcll1Q8JZS7 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Gm6345-202ENSMUST00000180900 204 ntBASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hmgcll1Q8JZS7 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hmgcll1Q8JZS7 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Rarb-207ENSMUST00000225921 2756 ntBASIC17.68■□□□□ 0.42
Hmgcll1Q8JZS7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hmgcll1Q8JZS7 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms