Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox30Q8CGW4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sox30Q8CGW4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox30Q8CGW4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox30Q8CGW4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox30Q8CGW4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Gm24841-201ENSMUST00000158676 357 ntBASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Gm8495-201ENSMUST00000188740 694 ntBASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox30Q8CGW4 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sox30Q8CGW4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Sox30Q8CGW4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms