Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.37■□□□□ 0.05
ShfQ8CG80 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ShfQ8CG80 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
ShfQ8CG80 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Gm11249-201ENSMUST00000117071 859 ntBASIC15.36■□□□□ 0.05
ShfQ8CG80 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
ShfQ8CG80 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ShfQ8CG80 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ShfQ8CG80 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.35■□□□□ 0.05
ShfQ8CG80 Gm3807-201ENSMUST00000193520 1168 ntBASIC15.35■□□□□ 0.05
ShfQ8CG80 Gm37179-201ENSMUST00000194862 823 ntBASIC15.35■□□□□ 0.05
ShfQ8CG80 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
ShfQ8CG80 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ShfQ8CG80 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ShfQ8CG80 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Gm12896-201ENSMUST00000118430 226 ntBASIC15.34■□□□□ 0.05
ShfQ8CG80 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.34■□□□□ 0.05
ShfQ8CG80 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.34■□□□□ 0.05
ShfQ8CG80 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.34■□□□□ 0.05
ShfQ8CG80 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ShfQ8CG80 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ShfQ8CG80 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
ShfQ8CG80 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ShfQ8CG80 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Gm13158-201ENSMUST00000122007 736 ntBASIC15.33■□□□□ 0.04
ShfQ8CG80 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.33■□□□□ 0.04
ShfQ8CG80 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.33■□□□□ 0.04
ShfQ8CG80 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ShfQ8CG80 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ShfQ8CG80 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Gm18025-201ENSMUST00000221733 862 ntBASIC15.32■□□□□ 0.04
ShfQ8CG80 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ShfQ8CG80 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ShfQ8CG80 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms