Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Gm4974-201ENSMUST00000209974 875 ntBASIC19.72■□□□□ 0.75
Smc2Q8CG48 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Smc2Q8CG48 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.71■□□□□ 0.75
Smc2Q8CG48 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc2Q8CG48 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.7■□□□□ 0.74
Smc2Q8CG48 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc2Q8CG48 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.7■□□□□ 0.74
Smc2Q8CG48 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.7■□□□□ 0.74
Smc2Q8CG48 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Gm5643-201ENSMUST00000117081 966 ntBASIC19.7■□□□□ 0.74
Smc2Q8CG48 Gm15378-201ENSMUST00000121894 207 ntBASIC19.7■□□□□ 0.74
Smc2Q8CG48 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc2Q8CG48 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Smc2Q8CG48 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.68■□□□□ 0.74
Smc2Q8CG48 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smc2Q8CG48 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.68■□□□□ 0.74
Smc2Q8CG48 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc2Q8CG48 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Gm43183-201ENSMUST00000200632 547 ntBASIC19.67■□□□□ 0.74
Smc2Q8CG48 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.67■□□□□ 0.74
Smc2Q8CG48 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc2Q8CG48 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
Smc2Q8CG48 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.66■□□□□ 0.74
Smc2Q8CG48 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc2Q8CG48 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms