Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Mir2861-201ENSMUST00000175539 82 ntBASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Gm44549-201ENSMUST00000208351 577 ntBASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Fam228aQ8CDW1 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Gm13401-201ENSMUST00000117074 291 ntBASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Gm13216-201ENSMUST00000117145 591 ntBASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Gm6211-202ENSMUST00000167849 925 ntBASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Fam228aQ8CDW1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Fam228aQ8CDW1 Gm7290-201ENSMUST00000104990 617 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Gm12918-201ENSMUST00000120234 636 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Gm15710-201ENSMUST00000121821 636 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Gm5075-201ENSMUST00000196916 622 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Fam228aQ8CDW1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Fam228aQ8CDW1 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Fam228aQ8CDW1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Fam228aQ8CDW1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms