Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim52Q8CDV4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Trim52Q8CDV4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim52Q8CDV4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21.28■■□□□ 1
Trim52Q8CDV4 Gm11336-201ENSMUST00000118168 334 ntBASIC21.28■■□□□ 1
Trim52Q8CDV4 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim52Q8CDV4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim52Q8CDV4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim52Q8CDV4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Trim52Q8CDV4 Olfr129-201ENSMUST00000122318 993 ntBASIC21.27■■□□□ 1
Trim52Q8CDV4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Trim52Q8CDV4 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Trim52Q8CDV4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim52Q8CDV4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Trim52Q8CDV4 Phf7-203ENSMUST00000226565 1971 ntBASIC21.27■□□□□ 0.99
Trim52Q8CDV4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Gm15794-201ENSMUST00000120182 631 ntBASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim52Q8CDV4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Gm8969-201ENSMUST00000199694 526 ntBASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Trim52Q8CDV4 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim52Q8CDV4 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim52Q8CDV4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms