Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vcpip1Q8CDG3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Haglr-201ENSMUST00000100000 2085 ntBASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vcpip1Q8CDG3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Gm13158-201ENSMUST00000122007 736 ntBASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vcpip1Q8CDG3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Trmt13-210ENSMUST00000198454 880 ntBASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vcpip1Q8CDG3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.47■□□□□ 0.55
Vcpip1Q8CDG3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vcpip1Q8CDG3 Gm26596-201ENSMUST00000180464 2655 ntBASIC18.46■□□□□ 0.54
Vcpip1Q8CDG3 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Vcpip1Q8CDG3 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms