Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lysmd4Q8CC84 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 AV356131-201ENSMUST00000206201 750 ntBASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Lysmd4Q8CC84 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Gm44549-201ENSMUST00000208351 577 ntBASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.43■□□□□ 0.06
Lysmd4Q8CC84 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Lysmd4Q8CC84 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.41■□□□□ 0.06
Lysmd4Q8CC84 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms