Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Gm12382-201ENSMUST00000122005 922 ntBASIC16.65■□□□□ 0.26
SynpoQ8CC35 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Gm29994-201ENSMUST00000195495 1193 ntBASIC16.65■□□□□ 0.26
SynpoQ8CC35 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SynpoQ8CC35 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
SynpoQ8CC35 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SynpoQ8CC35 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.63■□□□□ 0.25
SynpoQ8CC35 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.63■□□□□ 0.25
SynpoQ8CC35 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.63■□□□□ 0.25
SynpoQ8CC35 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.63■□□□□ 0.25
SynpoQ8CC35 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SynpoQ8CC35 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Gm11643-201ENSMUST00000119578 864 ntBASIC16.62■□□□□ 0.25
SynpoQ8CC35 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Gm37292-201ENSMUST00000192062 758 ntBASIC16.62■□□□□ 0.25
SynpoQ8CC35 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SynpoQ8CC35 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.61■□□□□ 0.25
SynpoQ8CC35 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.61■□□□□ 0.25
SynpoQ8CC35 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.61■□□□□ 0.25
SynpoQ8CC35 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SynpoQ8CC35 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SynpoQ8CC35 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms