Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC23.21■■□□□ 1.31
Cps1Q8C196 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cps1Q8C196 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC23.2■■□□□ 1.31
Cps1Q8C196 Dmtn-210ENSMUST00000228824 2377 ntBASIC23.2■■□□□ 1.31
Cps1Q8C196 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Cps1Q8C196 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
Cps1Q8C196 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cps1Q8C196 Gm13312-201ENSMUST00000119631 718 ntBASIC23.2■■□□□ 1.3
Cps1Q8C196 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC23.2■■□□□ 1.3
Cps1Q8C196 Gm18206-201ENSMUST00000207027 926 ntBASIC23.2■■□□□ 1.3
Cps1Q8C196 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cps1Q8C196 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cps1Q8C196 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cps1Q8C196 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cps1Q8C196 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cps1Q8C196 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cps1Q8C196 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cps1Q8C196 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cps1Q8C196 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Cps1Q8C196 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC23.18■■□□□ 1.3
Cps1Q8C196 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Cps1Q8C196 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Cps1Q8C196 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cps1Q8C196 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC23.17■■□□□ 1.3
Cps1Q8C196 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 AC108846.1-201ENSMUST00000214531 513 ntBASIC23.17■■□□□ 1.3
Cps1Q8C196 AC138767.1-201ENSMUST00000222661 415 ntBASIC23.17■■□□□ 1.3
Cps1Q8C196 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cps1Q8C196 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
Cps1Q8C196 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cps1Q8C196 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Cps1Q8C196 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC23.16■■□□□ 1.3
Cps1Q8C196 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Gm1818-201ENSMUST00000169406 1184 ntBASIC23.16■■□□□ 1.3
Cps1Q8C196 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC23.16■■□□□ 1.3
Cps1Q8C196 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Cps1Q8C196 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cps1Q8C196 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cps1Q8C196 Gm15165-201ENSMUST00000118140 502 ntBASIC23.15■■□□□ 1.3
Cps1Q8C196 Gm43073-201ENSMUST00000198200 1189 ntBASIC23.15■■□□□ 1.3
Cps1Q8C196 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC23.15■■□□□ 1.3
Cps1Q8C196 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC23.15■■□□□ 1.3
Cps1Q8C196 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Cps1Q8C196 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC23.15■■□□□ 1.3
Cps1Q8C196 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cps1Q8C196 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cps1Q8C196 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cps1Q8C196 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cps1Q8C196 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC23.14■■□□□ 1.3
Cps1Q8C196 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Cps1Q8C196 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cps1Q8C196 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Cps1Q8C196 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
Cps1Q8C196 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
Cps1Q8C196 Zfp264-201ENSMUST00000208656 1563 ntBASIC23.14■■□□□ 1.29
Cps1Q8C196 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Cps1Q8C196 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC23.13■■□□□ 1.29
Cps1Q8C196 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Cps1Q8C196 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 Mir5131-201ENSMUST00000175426 93 ntBASIC23.13■■□□□ 1.29
Cps1Q8C196 Gm27867-201ENSMUST00000184778 125 ntBASIC23.13■■□□□ 1.29
Cps1Q8C196 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 AC132104.2-201ENSMUST00000215011 266 ntBASIC23.13■■□□□ 1.29
Cps1Q8C196 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Cps1Q8C196 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms