Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Mir5133-201ENSMUST00000174955 77 ntBASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Slc44a2Q8BY89 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Gm6211-202ENSMUST00000167849 925 ntBASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Slc44a2Q8BY89 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.74■□□□□ 0.27
Slc44a2Q8BY89 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Slc44a2Q8BY89 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Gm13216-201ENSMUST00000117145 591 ntBASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Gm12933-201ENSMUST00000120203 872 ntBASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.72■□□□□ 0.27
Slc44a2Q8BY89 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Slc44a2Q8BY89 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms