Protein–RNA interactions for Protein: Q8BXQ8

Fam53c, Protein FAM53C, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam53cQ8BXQ8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fam53cQ8BXQ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Fam53cQ8BXQ8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Fam53cQ8BXQ8 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Fam53cQ8BXQ8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Fam53cQ8BXQ8 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Fam53cQ8BXQ8 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Fam53cQ8BXQ8 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Asic1-205ENSMUST00000228185 1818 ntBASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Fam53cQ8BXQ8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Gm22238-201ENSMUST00000175222 88 ntBASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Fam53cQ8BXQ8 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms