Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cpsf4Q8BQZ5 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Cpsf4Q8BQZ5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf4Q8BQZ5 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Cpsf4Q8BQZ5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Gm42545-201ENSMUST00000202755 922 ntBASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cpsf4Q8BQZ5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Gm18025-201ENSMUST00000221733 862 ntBASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cpsf4Q8BQZ5 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cpsf4Q8BQZ5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Mir2861-201ENSMUST00000175539 82 ntBASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cpsf4Q8BQZ5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms