Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Gm6576-201ENSMUST00000169678 883 ntBASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Gm42545-201ENSMUST00000202755 922 ntBASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Clrn3Q8BHH8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Mir8112-201ENSMUST00000184382 131 ntBASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Clrn3Q8BHH8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Gm37292-201ENSMUST00000192062 758 ntBASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Clrn3Q8BHH8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Gm13401-201ENSMUST00000117074 291 ntBASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Clrn3Q8BHH8 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Clrn3Q8BHH8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Clrn3Q8BHH8 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.1■□□□□ 0.17
Clrn3Q8BHH8 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clrn3Q8BHH8 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Clrn3Q8BHH8 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms