Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Depdc1bQ8BH88 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Gm15565-201ENSMUST00000118890 427 ntBASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Mir5122-201ENSMUST00000175004 89 ntBASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Gm18025-201ENSMUST00000221733 862 ntBASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Depdc1bQ8BH88 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Gm11643-201ENSMUST00000119578 864 ntBASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Depdc1bQ8BH88 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Depdc1bQ8BH88 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Gm43183-201ENSMUST00000200632 547 ntBASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Depdc1bQ8BH88 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Gm42545-201ENSMUST00000202755 922 ntBASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Depdc1bQ8BH88 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms