Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Reep4-203ENSMUST00000226563 1444 ntBASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Gm43060-201ENSMUST00000200621 289 ntBASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Slc5a7Q8BGY9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Slc5a7Q8BGY9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Gm21956-201ENSMUST00000179946 522 ntBASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Slc5a7Q8BGY9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Gm9988-201ENSMUST00000069786 435 ntBASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Slc5a7Q8BGY9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Slc5a7Q8BGY9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Slc5a7Q8BGY9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms