Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Nespas-201ENSMUST00000143738 1083 ntBASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Gm6420-201ENSMUST00000193885 723 ntBASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Smndc1Q8BGT7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Smndc1Q8BGT7 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Smndc1Q8BGT7 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Smndc1Q8BGT7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Gm6365-201ENSMUST00000054711 744 ntBASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Smndc1Q8BGT7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms