Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Gm45774-201ENSMUST00000211992 2665 ntBASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Samm50Q8BGH2 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Gm45412-201ENSMUST00000210217 2275 ntBASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Samm50Q8BGH2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Gm13181-201ENSMUST00000120117 1069 ntBASIC20.15■□□□□ 0.82
Samm50Q8BGH2 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Samm50Q8BGH2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Samm50Q8BGH2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
Samm50Q8BGH2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Samm50Q8BGH2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Gm15375-201ENSMUST00000119510 849 ntBASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.14■□□□□ 0.81
Samm50Q8BGH2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Samm50Q8BGH2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Samm50Q8BGH2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.12■□□□□ 0.81
Samm50Q8BGH2 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Samm50Q8BGH2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms